Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution
| ID | Title | Section/Topic | Authors | Keywords |
|---|
| 309 | Analysis of paralogs in target enrichment data pinpoints multiple ancient allopolyploidy events in Alchemilla s.l. (Rosaceae) | Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution | Morales-Briones, Diego; Gehrke, Berit; Huang, Chien-Hsun; Liston, Aaron; Ma, Hong; Marx, Hannah; Tank, David; Yang, Ya. | Alchemilla
allopolyploidy
Gene tree discordance
Hyb-Seq
hybridization
Orthology inference
Paralogs
Rosaceae
Target Enrichment
Whole-genome duplication |
| 473 | A phylogenomic investigation into polyploidy and cryptic diversity in the true blueberries (Vaccinium section Cyanococcus) | Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution | Crowl, Andrew; Crowl, Andrew; Tiley, George; Fritsch, Peter; Manos, Paul. | Alleles
Angiosperm353
Ericaceae
hybridization
HybSeq
phasing
polyploidy
Target Enrichment
Vaccinium |
| 655 | Assessing the importance of hybridization in the diversification of Anacampseros (Anacampserotaceae, Caryophyllales) in the Cape Floristic Region using targeted sequence capture data | Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution | Moore, Abigail; Edwards, Erika. | Caryophyllales
Portullugo
Portulacineae
target capture
hybridization
reticulate evolution
Anacampseros
Cape Floristic Region |
| 1050 | Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution | Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution | Morales-Briones, Diego. | |
| 489 | Phasing alleles improves phylogenetic network inference with allopolyploids | Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution | Tiley, George; Crowl, Andrew; Crowl, Andrew; Sessa, Emily; Burleigh, Gordon. | phasing
polyploidy
Multispecies Coalescent
networks
Dryopteris
Target Enrichment |
| 467 | Phylogenomics Yields New Insight Into Relationships Within Vernonieae (Asteraceae) | Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution | Siniscalchi, Carolina; Loeuille, Benoit; Mandel, Jennifer; Pirani, José Rubens. | Compositae
Hyb-Seq
phylogeny
target capture |
| 282 | Polyploidy complicates resolution of evolutionary relationships in Tibouchina s.s. (Melastomataceae) | Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution | Jantzen, Johanna; Freitas Oliveira, Ana Luiza; Guimaraes, Paulo; Soltis, Douglas; Soltis, Pamela. | polyploidy
Target Enrichment
phylogenomics
Melastomataceae |
| 747 | Strategies for assessing phylogenomic conflict and testing hybridization, with an example from Heuchera | Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution | Folk, Ryan. | hybridization
methods
phylogenomics
chloroplast capture |
| 363 | Targeted long reads from herbarium specimens enable to identify allopolyploidization events of arctic/subarctic Silene sect. Physolychnis | Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution | Quatela, Anne-Sophie; Cangren, Patrik; De Boer, Hugo; Bacon, Christine; Oxelman, Bengt. | long read sequencing
herbarium specimens
Silene section Physolychnis
allopolyploidization
Target Enrichment |
| 612 | Testing hypothesized reticulate evolution in the Cornales using targeted enrichment data | Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution | Thomas, Shawn; Liu, Xiang; Cummings, Amanda; Pokorny, Lisa; Xiang, Jenny; Leebens-Mack, Jim. | phylogenomics
Target Enrichment
reticulate evolution
Angiosperm353 |
