Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution
ID | Title | Section/Topic | Authors | Keywords |
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309 | Analysis of paralogs in target enrichment data pinpoints multiple ancient allopolyploidy events in Alchemilla s.l. (Rosaceae) | Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution | Morales-Briones, Diego; Gehrke, Berit; Huang, Chien-Hsun; Liston, Aaron; Ma, Hong; Marx, Hannah; Tank, David; Yang, Ya. | Alchemilla allopolyploidy Gene tree discordance Hyb-Seq hybridization Orthology inference Paralogs Rosaceae Target Enrichment Whole-genome duplication |
473 | A phylogenomic investigation into polyploidy and cryptic diversity in the true blueberries (Vaccinium section Cyanococcus) | Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution | Crowl, Andrew; Crowl, Andrew; Tiley, George; Fritsch, Peter; Manos, Paul. | Alleles Angiosperm353 Ericaceae hybridization HybSeq phasing polyploidy Target Enrichment Vaccinium |
655 | Assessing the importance of hybridization in the diversification of Anacampseros (Anacampserotaceae, Caryophyllales) in the Cape Floristic Region using targeted sequence capture data | Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution | Moore, Abigail; Edwards, Erika. | Caryophyllales Portullugo Portulacineae target capture hybridization reticulate evolution Anacampseros Cape Floristic Region |
1050 | Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution | Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution | Morales-Briones, Diego. | |
489 | Phasing alleles improves phylogenetic network inference with allopolyploids | Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution | Tiley, George; Crowl, Andrew; Crowl, Andrew; Sessa, Emily; Burleigh, Gordon. | phasing polyploidy Multispecies Coalescent networks Dryopteris Target Enrichment |
467 | Phylogenomics Yields New Insight Into Relationships Within Vernonieae (Asteraceae) | Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution | Siniscalchi, Carolina; Loeuille, Benoit; Mandel, Jennifer; Pirani, José Rubens. | Compositae Hyb-Seq phylogeny target capture |
282 | Polyploidy complicates resolution of evolutionary relationships in Tibouchina s.s. (Melastomataceae) | Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution | Jantzen, Johanna; Freitas Oliveira, Ana Luiza; Guimaraes, Paulo; Soltis, Douglas; Soltis, Pamela. | polyploidy Target Enrichment phylogenomics Melastomataceae |
747 | Strategies for assessing phylogenomic conflict and testing hybridization, with an example from Heuchera | Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution | Folk, Ryan. | hybridization methods phylogenomics chloroplast capture |
363 | Targeted long reads from herbarium specimens enable to identify allopolyploidization events of arctic/subarctic Silene sect. Physolychnis | Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution | Quatela, Anne-Sophie; Cangren, Patrik; De Boer, Hugo; Bacon, Christine; Oxelman, Bengt. | long read sequencing herbarium specimens Silene section Physolychnis allopolyploidization Target Enrichment |
612 | Testing hypothesized reticulate evolution in the Cornales using targeted enrichment data | Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution | Thomas, Shawn; Liu, Xiang; Cummings, Amanda; Pokorny, Lisa; Xiang, Jenny; Leebens-Mack, Jim. | phylogenomics Target Enrichment reticulate evolution Angiosperm353 |